Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
MBD3L3A6NE82 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 CYP2T1P-202ENST00000641596 2535 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 ANKRD19P-201ENST00000338192 862 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 BCRP2-202ENST00000447763 634 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AC093433.1-201ENST00000458048 571 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 BCRP6-201ENST00000510112 632 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 BCRP7-201ENST00000511549 544 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 PDIA3P1-201ENST00000471856 1510 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.83□□□□□ -0.2
MBD3L3A6NE82 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MBD3L3A6NE82 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 KLF2P4-201ENST00000451959 1225 ntBASIC13.82□□□□□ -0.2
MBD3L3A6NE82 AC022137.2-201ENST00000503482 481 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms