Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC005089.1-201ENST00000619486 2241 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 FAM58CP-201ENST00000435741 640 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AL591424.1-201ENST00000442569 1213 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC079140.1-201ENST00000508039 487 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SLC25A1P1-201ENST00000528351 927 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 KRT8P23-201ENST00000560090 1207 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC026979.3-201ENST00000607315 403 ntBASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV5-3A0A0A0MS03 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV5-3A0A0A0MS03 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AP3S2-216ENST00000617003 1561 ntBASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 RPL5P21-201ENST00000404620 815 ntBASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 KRT18P3-201ENST00000451602 1288 ntBASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 AC026120.1-201ENST00000611536 926 ntBASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 FAM197Y3-203ENST00000618346 717 ntBASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV5-3A0A0A0MS03 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV5-3A0A0A0MS03 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms