Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 GRK6P1-201ENST00000400595 1711 ntBASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HLA-DRB4X5D2U9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 AL592309.1-201ENST00000443127 649 ntBASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
HLA-DRB4X5D2U9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AL009178.2-201ENST00000597278 2719 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 MIR346-201ENST00000362234 95 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 HLA-H-201ENST00000383620 1096 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 RPSAP43-201ENST00000402237 625 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 HAUS4P1-201ENST00000406739 1145 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC092865.5-201ENST00000545435 363 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 LINC01225-203ENST00000563550 1244 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC022145.2-201ENST00000598203 171 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC055717.3-201ENST00000622967 595 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 AC105339.1-204ENST00000636249 355 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 UXT-AS1-201ENST00000590504 1525 ntBASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms