Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 AC025678.2-201ENST00000562061 970 ntBASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 LINC01225-203ENST00000563550 1244 ntBASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 SSR4P1-203ENST00000599569 2260 ntBASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX49Q9Y6V7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 POU5F1P6-201ENST00000466990 990 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 AC005412.3-201ENST00000580309 715 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 AC011467.4-201ENST00000594891 528 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 AC016027.1-202ENST00000607927 1699 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms