Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 HLA-K-203ENST00000430151 1046 ntBASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 CHMP1AP1-201ENST00000445563 662 ntBASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 SAMD11P1-201ENST00000571429 661 ntBASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 AC026740.1-201ENST00000607068 791 ntBASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC23.42■■□□□ 1.34
CDC42BPBQ9Y5S2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 TPM3P8-201ENST00000330554 643 ntBASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 NUP210P1-202ENST00000504322 710 ntBASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
CDC42BPBQ9Y5S2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 DUX4L47-201ENST00000566374 394 ntBASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 AC091544.8-201ENST00000619490 361 ntBASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDC42BPBQ9Y5S2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 HLA-DQB2-229ENST00000411527 1059 ntBASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 RN7SL11P-201ENST00000471305 293 ntBASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AC018635.2-201ENST00000608625 364 ntBASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 CLUHP2-201ENST00000426660 1303 ntBASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPBQ9Y5S2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPBQ9Y5S2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms