Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGB1Q9Y5G3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
PCDHGB1Q9Y5G3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB1Q9Y5G3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 AC107918.2-201ENST00000530817 355 ntBASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB1Q9Y5G3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 AC148477.4-201ENST00000613430 1793 ntBASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 MIR574-201ENST00000385209 96 ntBASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGB1Q9Y5G3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms