Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC245100.5-201ENST00000452108 331 ntBASIC17.78■□□□□ 0.44
TRIM17Q9Y577 PHKG1P2-201ENST00000457537 863 ntBASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC024681.1-201ENST00000521917 487 ntBASIC17.78■□□□□ 0.44
TRIM17Q9Y577 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 AC009053.2-201ENST00000563701 2365 ntBASIC17.77■□□□□ 0.44
TRIM17Q9Y577 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM17Q9Y577 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM17Q9Y577 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 AC136604.1-201ENST00000418535 575 ntBASIC17.76■□□□□ 0.43
TRIM17Q9Y577 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 RN7SL736P-201ENST00000613111 269 ntBASIC17.76■□□□□ 0.43
TRIM17Q9Y577 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 AL603756.1-201ENST00000606511 2163 ntBASIC17.76■□□□□ 0.43
TRIM17Q9Y577 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM17Q9Y577 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms