Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00588Q9Y4M8 AC018892.3-201ENST00000623986 2499 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CLK3P2-201ENST00000427566 1453 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC136604.1-201ENST00000418535 575 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC011495.1-201ENST00000498085 584 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AL158212.4-201ENST00000624062 1286 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC006449.5-201ENST00000610658 2098 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 AC011477.6-201ENST00000604980 1927 ntBASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00588Q9Y4M8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AC098850.1-201ENST00000419919 790 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 KRT18P64-201ENST00000434946 1219 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 ELK1P1-201ENST00000485699 580 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SLED1-202ENST00000512051 380 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms