Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.42■□□□□ 0.38
USP20Q9Y2K6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
USP20Q9Y2K6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP20Q9Y2K6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP20Q9Y2K6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP20Q9Y2K6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 API5-211ENST00000534695 560 ntTSL 5 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 AL450472.2-201ENST00000603663 1156 ntBASIC17.41■□□□□ 0.38
USP20Q9Y2K6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 BTBD7P1-201ENST00000447253 1453 ntBASIC17.41■□□□□ 0.38
USP20Q9Y2K6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP20Q9Y2K6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 CRB3P1-201ENST00000449338 276 ntBASIC17.4■□□□□ 0.38
USP20Q9Y2K6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AL662799.1-202ENST00000614205 422 ntBASIC17.4■□□□□ 0.38
USP20Q9Y2K6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP20Q9Y2K6 Z97205.2-201ENST00000564697 1639 ntBASIC17.39■□□□□ 0.38
USP20Q9Y2K6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.39■□□□□ 0.38
USP20Q9Y2K6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP20Q9Y2K6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
USP20Q9Y2K6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP20Q9Y2K6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP20Q9Y2K6 PIN1P1-201ENST00000412108 996 ntBASIC17.39■□□□□ 0.37
USP20Q9Y2K6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms