Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC241585.1-201ENST00000433527 519 ntBASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 RPL13P2-201ENST00000440687 659 ntBASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SDHAP3-202ENST00000515467 728 ntBASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC074044.1-201ENST00000609673 707 ntBASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 MTATP6P19-201ENST00000413797 659 ntBASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC055876.3-201ENST00000431496 288 ntBASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 SLED1-202ENST00000512051 380 ntBASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC138649.4-201ENST00000612222 287 ntBASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC126177.1-201ENST00000547829 2218 ntBASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGC3Q9UN70 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGC3Q9UN70 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGC3Q9UN70 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
PCDHGC3Q9UN70 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGC3Q9UN70 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.71■□□□□ 0.26
PCDHGC3Q9UN70 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AC104640.1-201ENST00000562617 2109 ntBASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AC009477.1-201ENST00000452936 217 ntBASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC3Q9UN70 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms