Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 AC074386.1-202ENST00000463561 864 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PRYP6-201ENST00000514804 343 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PDPK2P-202ENST00000562415 1191 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 AC067930.6-201ENST00000623257 4947 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 AC007292.2-201ENST00000593524 1812 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.28■□□□□ 0.52
USP25Q9UHP3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 AP002472.1-201ENST00000577490 586 ntBASIC18.27■□□□□ 0.52
USP25Q9UHP3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
USP25Q9UHP3 AC005089.1-201ENST00000619486 2241 ntBASIC18.27■□□□□ 0.52
USP25Q9UHP3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP25Q9UHP3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 AC011477.6-201ENST00000604980 1927 ntBASIC18.27■□□□□ 0.51
USP25Q9UHP3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.27■□□□□ 0.51
USP25Q9UHP3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP25Q9UHP3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 AC104581.4-201ENST00000623126 3052 ntBASIC18.26■□□□□ 0.51
USP25Q9UHP3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
USP25Q9UHP3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP25Q9UHP3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms