Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD9Q9P000 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COMMD9Q9P000 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD9Q9P000 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
COMMD9Q9P000 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COMMD9Q9P000 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.64□□□□□ -0.23
COMMD9Q9P000 AC232323.1-201ENST00000540724 2099 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 REXO1L5P-201ENST00000622260 2098 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 RBM17P3-201ENST00000417687 1192 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ATP5G2P1-201ENST00000433580 426 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 AC106795.1-205ENST00000512851 1056 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 AL139424.1-201ENST00000607572 797 ntBASIC13.63□□□□□ -0.23
COMMD9Q9P000 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms