Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC074338.1-201ENST00000416825 156 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 SDHAP3-202ENST00000515467 728 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC044860.1-202ENST00000559481 777 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC009407.1-201ENST00000568958 598 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AL109936.8-201ENST00000641772 604 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 CICP6-201ENST00000457191 2729 ntBASIC16.92■□□□□ 0.3
CISHQ9NSE2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CISHQ9NSE2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.92■□□□□ 0.3
CISHQ9NSE2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CISHQ9NSE2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.91■□□□□ 0.3
CISHQ9NSE2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 MIR770-201ENST00000390219 98 ntBASIC16.9■□□□□ 0.3
CISHQ9NSE2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AL512638.1-201ENST00000457493 794 ntBASIC16.9■□□□□ 0.3
CISHQ9NSE2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AC074044.1-201ENST00000609673 707 ntBASIC16.9■□□□□ 0.3
CISHQ9NSE2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms