Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AP003680.1-201ENST00000598970 3660 ntBASIC14.77□□□□□ -0.05
UBQLN3Q9H347 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 HLA-V-204ENST00000476601 1289 ntBASIC14.76□□□□□ -0.05
UBQLN3Q9H347 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.76□□□□□ -0.05
UBQLN3Q9H347 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 NFIC-211ENST00000641145 8399 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 BASP1P1-201ENST00000430708 665 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AC093214.1-201ENST00000511688 1107 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 RNA5SP421-201ENST00000516864 134 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AL365330.1-201ENST00000607459 531 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 RN7SL828P-201ENST00000607615 303 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AL133215.2-201ENST00000609242 977 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 SPDYE12P-201ENST00000618416 771 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AC073592.8-201ENST00000624126 511 ntBASIC14.75□□□□□ -0.05
UBQLN3Q9H347 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
UBQLN3Q9H347 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms