Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 MIR4313-201ENST00000580760 101 ntBASIC14□□□□□ -0.17
SLIRPQ9GZT3 AP005901.3-202ENST00000581653 237 ntBASIC14□□□□□ -0.17
SLIRPQ9GZT3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14□□□□□ -0.17
SLIRPQ9GZT3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 WASH3P-207ENST00000560956 1394 ntBASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 FO538757.1-201ENST00000623083 1397 ntBASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AC018892.3-201ENST00000623986 2499 ntBASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AF228730.7-201ENST00000641842 219 ntBASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLIRPQ9GZT3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms