Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AC016027.1-202ENST00000607927 1699 ntBASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AL591424.1-201ENST00000442569 1213 ntBASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AC074386.1-202ENST00000463561 864 ntBASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 PDPK2P-202ENST00000562415 1191 ntBASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AC068137.2-201ENST00000605408 478 ntBASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AL078644.1-201ENST00000609881 752 ntBASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.72□□□□□ -0.37
CHRDL1Q9BU40 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 KRT18P34-201ENST00000488218 1270 ntBASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 FAM197Y3-203ENST00000618346 717 ntBASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CHRDL1Q9BU40 AC010491.1-201ENST00000563101 2797 ntBASIC12.71□□□□□ -0.38
CHRDL1Q9BU40 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms