Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 WFDC1-204ENST00000613603 549 ntBASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM47Q9BQJ4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 CU639417.3-201ENST00000624240 1404 ntBASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AP006294.1-201ENST00000415407 339 ntBASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC104596.2-201ENST00000512793 793 ntBASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 CR383656.12-201ENST00000549567 513 ntBASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM47Q9BQJ4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AC063926.2-201ENST00000623766 1308 ntBASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 PRAL-201ENST00000624952 3286 ntBASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AP005117.1-202ENST00000581724 1908 ntBASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 KRT18P43-201ENST00000469825 1281 ntBASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 AC000095.1-201ENST00000603208 874 ntBASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM47Q9BQJ4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms