Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 SLC22A20-204ENST00000530038 1673 ntBASIC12.76□□□□□ -0.37
RNF2Q99496 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.76□□□□□ -0.37
RNF2Q99496 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
RNF2Q99496 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.76□□□□□ -0.37
RNF2Q99496 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RNF2Q99496 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RNF2Q99496 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF2Q99496 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.76□□□□□ -0.37
RNF2Q99496 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.75□□□□□ -0.37
RNF2Q99496 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 CXCL1P1-201ENST00000502804 216 ntBASIC12.75□□□□□ -0.37
RNF2Q99496 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 AC120114.3-201ENST00000611923 658 ntBASIC12.75□□□□□ -0.37
RNF2Q99496 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.75□□□□□ -0.37
RNF2Q99496 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF2Q99496 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RNF2Q99496 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RNF2Q99496 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RNF2Q99496 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RNF2Q99496 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RNF2Q99496 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 FAM185BP-201ENST00000443595 716 ntBASIC12.74□□□□□ -0.37
RNF2Q99496 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.74□□□□□ -0.37
RNF2Q99496 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF2Q99496 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF2Q99496 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF2Q99496 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms