Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 AL607033.1-201ENST00000623900 1599 ntBASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK5RAP1Q96SZ6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 AC012645.4-201ENST00000610691 1061 ntBASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK5RAP1Q96SZ6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AC068418.2-201ENST00000577309 3703 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RN7SL692P-201ENST00000464677 288 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AC123567.1-201ENST00000548294 1261 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 CR383656.12-201ENST00000549567 513 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AL391069.4-201ENST00000609583 481 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AC007431.3-201ENST00000623221 587 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 AL158212.4-201ENST00000624062 1286 ntBASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDK5RAP1Q96SZ6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms