Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 AC136604.1-201ENST00000418535 575 ntBASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC85AQ96PX6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 TOMM22P5-201ENST00000416399 439 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 RPS2P32-201ENST00000439199 892 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AC234783.1-201ENST00000441761 496 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 VDAC1P7-201ENST00000462417 847 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 USP32P1-208ENST00000506594 1164 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 BRI3BPP1-201ENST00000594224 787 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AC018665.1-201ENST00000622927 1362 ntBASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC85AQ96PX6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 TDH-203ENST00000531764 1110 ntBASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms