Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 AC011742.3-201ENST00000439053 820 ntBASIC16.9■□□□□ 0.3
ALPK3Q96L96 CHMP1AP1-201ENST00000445563 662 ntBASIC16.9■□□□□ 0.3
ALPK3Q96L96 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
ALPK3Q96L96 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALPK3Q96L96 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.89■□□□□ 0.3
ALPK3Q96L96 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
ALPK3Q96L96 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 AL139094.1-201ENST00000405549 1188 ntBASIC16.89■□□□□ 0.29
ALPK3Q96L96 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 AC007881.3-201ENST00000608897 607 ntBASIC16.89■□□□□ 0.29
ALPK3Q96L96 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 AC242376.2-201ENST00000619355 883 ntBASIC16.89■□□□□ 0.29
ALPK3Q96L96 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALPK3Q96L96 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ALPK3Q96L96 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 CASP16P-204ENST00000635032 809 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 AL157791.1-201ENST00000553667 1699 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 CAP2P1-201ENST00000557743 1390 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 MIR4754-201ENST00000582477 89 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 AC009084.3-201ENST00000623356 437 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALPK3Q96L96 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.88■□□□□ 0.29
ALPK3Q96L96 AC080080.1-201ENST00000625121 2420 ntBASIC16.88■□□□□ 0.29
ALPK3Q96L96 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms