Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 RPL37AP1-201ENST00000412502 279 ntBASIC18.46■□□□□ 0.55
PGBD1Q96JS3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AC027369.6-201ENST00000525520 931 ntBASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AL589739.1-201ENST00000607720 493 ntBASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AC073592.8-201ENST00000624126 511 ntBASIC18.46■□□□□ 0.55
PGBD1Q96JS3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PGBD1Q96JS3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.46■□□□□ 0.54
PGBD1Q96JS3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AC134407.2-201ENST00000625089 1978 ntBASIC18.45■□□□□ 0.54
PGBD1Q96JS3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AC245100.5-201ENST00000452108 331 ntBASIC18.45■□□□□ 0.54
PGBD1Q96JS3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 TMBIM7P-203ENST00000641617 1718 ntBASIC18.45■□□□□ 0.54
PGBD1Q96JS3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD1Q96JS3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AL109954.1-202ENST00000564051 2148 ntBASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AC006058.4-201ENST00000624016 1670 ntBASIC18.44■□□□□ 0.54
PGBD1Q96JS3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AL158211.3-201ENST00000607385 239 ntBASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AC105250.1-201ENST00000509378 2057 ntBASIC18.44■□□□□ 0.54
PGBD1Q96JS3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms