Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 AC134407.2-201ENST00000625089 1978 ntBASIC22.1■■□□□ 1.13
TMC1Q8TDI8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TMC1Q8TDI8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 SUPT20HL2-201ENST00000486479 2409 ntBASIC22.09■■□□□ 1.13
TMC1Q8TDI8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 KRT17P7-201ENST00000451704 1104 ntBASIC22.09■■□□□ 1.13
TMC1Q8TDI8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 LINC01115-203ENST00000606068 577 ntBASIC22.09■■□□□ 1.13
TMC1Q8TDI8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 AC007950.2-201ENST00000615045 2347 ntBASIC22.09■■□□□ 1.13
TMC1Q8TDI8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMC1Q8TDI8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 AC244107.1-201ENST00000442033 332 ntBASIC22.08■■□□□ 1.13
TMC1Q8TDI8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 AC092337.1-201ENST00000568699 1129 ntBASIC22.08■■□□□ 1.13
TMC1Q8TDI8 PAUPAR-201ENST00000630360 2965 ntBASIC22.08■■□□□ 1.13
TMC1Q8TDI8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
TMC1Q8TDI8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
TMC1Q8TDI8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC132872.4-202ENST00000622924 2756 ntBASIC22.07■■□□□ 1.12
TMC1Q8TDI8 ZBTB45P2-201ENST00000452245 1531 ntBASIC22.07■■□□□ 1.12
TMC1Q8TDI8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 MYCLP2-201ENST00000449268 967 ntBASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMC1Q8TDI8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms