Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA3Q8TBC4 CICP6-201ENST00000457191 2729 ntBASIC16.83■□□□□ 0.28
UBA3Q8TBC4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBA3Q8TBC4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL607033.1-201ENST00000623900 1599 ntBASIC16.82■□□□□ 0.28
UBA3Q8TBC4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 BASP1P1-201ENST00000430708 665 ntBASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AC004890.2-204ENST00000481968 304 ntBASIC16.82■□□□□ 0.28
UBA3Q8TBC4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL355385.1-201ENST00000606123 409 ntBASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 AL109936.8-201ENST00000641772 604 ntBASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA3Q8TBC4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.81■□□□□ 0.28
UBA3Q8TBC4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 TARDBPP1-201ENST00000442013 1203 ntBASIC16.81■□□□□ 0.28
UBA3Q8TBC4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 AC009407.1-201ENST00000568958 598 ntBASIC16.81■□□□□ 0.28
UBA3Q8TBC4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 AC092127.1-201ENST00000567093 3455 ntBASIC16.81■□□□□ 0.28
UBA3Q8TBC4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA3Q8TBC4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms