Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 AP005117.1-202ENST00000581724 1908 ntBASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 AC100757.3-201ENST00000622361 1406 ntBASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 AC241585.1-201ENST00000433527 519 ntBASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC148Q8NFR7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AL390754.1-201ENST00000619088 582 ntBASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC148Q8NFR7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AC087499.5-201ENST00000452760 1342 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms