Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.04■□□□□ -0
SIMC1Q8NDZ2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 LINC00628-201ENST00000628516 1289 ntBASIC15.04■□□□□ -0
SIMC1Q8NDZ2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SIMC1Q8NDZ2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 BNIP3P1-202ENST00000550043 1585 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AL691432.1-201ENST00000596308 1422 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AC245100.5-201ENST00000452108 331 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 HLA-J-203ENST00000494367 1087 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 MIR4453-201ENST00000584019 89 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms