Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 AC015910.1-201ENST00000579400 975 ntBASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 PCDHB19P-201ENST00000570871 2371 ntBASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 AC007969.1-201ENST00000433675 447 ntBASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 AC005695.3-201ENST00000614522 232 ntBASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CARMIL3Q8ND23 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AC023310.1-201ENST00000554836 735 ntBASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.7■□□□□ 0.74
CARMIL3Q8ND23 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms