Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 RPL37AP1-201ENST00000412502 279 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AC055876.3-201ENST00000431496 288 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PHKG1P2-201ENST00000457537 863 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 RNA5SP421-201ENST00000516864 134 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AC138649.4-201ENST00000612222 287 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TEX28P1-201ENST00000613479 1221 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 TEX28P2-201ENST00000617764 1221 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 AL390754.1-201ENST00000619088 582 ntBASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB42Q8N4Z0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC112504.1-201ENST00000623415 1841 ntBASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC027796.2-201ENST00000575326 344 ntBASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AL033527.5-202ENST00000641632 1098 ntBASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB42Q8N4Z0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms