Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC006449.5-201ENST00000610658 2098 ntBASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC092933.1-201ENST00000393644 945 ntBASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC007551.1-201ENST00000457394 519 ntBASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 PKD1P5-201ENST00000532415 10291 ntBASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYNPOQ8N3V7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 BAATP1-201ENST00000412284 1225 ntBASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 AC074338.1-201ENST00000416825 156 ntBASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYNPOQ8N3V7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
SYNPOQ8N3V7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms