Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 C1QBPP1-201ENST00000400117 770 ntBASIC16.28■□□□□ 0.2
SIX5Q8N196 AC106760.1-201ENST00000508690 800 ntBASIC16.28■□□□□ 0.2
SIX5Q8N196 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX5Q8N196 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX5Q8N196 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.28■□□□□ 0.2
SIX5Q8N196 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX5Q8N196 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX5Q8N196 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.28■□□□□ 0.2
SIX5Q8N196 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 RHOXF1P1-202ENST00000635473 501 ntBASIC16.28■□□□□ 0.2
SIX5Q8N196 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 GGT4P-201ENST00000623672 1708 ntBASIC16.28■□□□□ 0.2
SIX5Q8N196 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX5Q8N196 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX5Q8N196 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 MIR326-201ENST00000362220 95 ntBASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX5Q8N196 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX5Q8N196 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX5Q8N196 DUX4L45-201ENST00000566406 1057 ntBASIC16.27■□□□□ 0.2
SIX5Q8N196 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX5Q8N196 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.27■□□□□ 0.2
SIX5Q8N196 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.27■□□□□ 0.2
SIX5Q8N196 AC106872.11-201ENST00000605838 421 ntBASIC16.27■□□□□ 0.2
SIX5Q8N196 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX5Q8N196 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX5Q8N196 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.27■□□□□ 0.19
SIX5Q8N196 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 MSTO2P-201ENST00000314835 1709 ntBASIC16.27■□□□□ 0.19
SIX5Q8N196 AC005622.1-201ENST00000636801 1703 ntBASIC16.27■□□□□ 0.19
SIX5Q8N196 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.27■□□□□ 0.19
SIX5Q8N196 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SIX5Q8N196 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX5Q8N196 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX5Q8N196 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX5Q8N196 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX5Q8N196 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX5Q8N196 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms