Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 SPDYE17-201ENST00000412399 783 ntBASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AL844908.2-201ENST00000609461 460 ntBASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AL033527.5-202ENST00000641632 1098 ntBASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC006449.6-201ENST00000612330 2296 ntBASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC009477.1-201ENST00000452936 217 ntBASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 SERBP1P5-201ENST00000510079 1181 ntBASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM48Q8IWZ4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
TRIM48Q8IWZ4 NORAD-201ENST00000565493 5339 ntBASIC15.64■□□□□ 0.1
TRIM48Q8IWZ4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM48Q8IWZ4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms