Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 KRT18P64-201ENST00000434946 1219 ntBASIC17.13■□□□□ 0.33
HERC6Q8IVU3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 FAM86HP-204ENST00000513466 959 ntBASIC17.13■□□□□ 0.33
HERC6Q8IVU3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 AC105020.1-201ENST00000435356 2205 ntBASIC17.13■□□□□ 0.33
HERC6Q8IVU3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 MIR326-201ENST00000362220 95 ntBASIC17.12■□□□□ 0.33
HERC6Q8IVU3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 AP001258.2-201ENST00000529891 490 ntBASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 AL022328.3-201ENST00000607943 679 ntBASIC17.12■□□□□ 0.33
HERC6Q8IVU3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.12■□□□□ 0.33
HERC6Q8IVU3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HERC6Q8IVU3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 SLC25A24P2-201ENST00000415059 510 ntBASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 C2orf27AP3-201ENST00000434123 579 ntBASIC17.11■□□□□ 0.33
HERC6Q8IVU3 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 RN7SL190P-201ENST00000582519 257 ntBASIC17.11■□□□□ 0.33
HERC6Q8IVU3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AL354718.3-201ENST00000616414 581 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms