Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 AL020989.1-201ENST00000422979 469 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RN7SL606P-201ENST00000472779 293 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 TERC-201ENST00000602385 541 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 AC089987.1-201ENST00000551654 2209 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 LINC01568-207ENST00000641790 1380 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 GPAA1P2-202ENST00000606848 1787 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 AL591122.2-201ENST00000624125 1853 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 MIR935-201ENST00000401179 91 ntBASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms