Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 AL035456.1-201ENST00000456064 1369 ntBASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB11FIP4Q86YS3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 TSPY26P-202ENST00000565928 3884 ntBASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 AL512361.1-201ENST00000554200 418 ntBASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 MIR4313-201ENST00000580760 101 ntBASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 AC005498.2-205ENST00000593218 784 ntBASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB11FIP4Q86YS3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 AC015911.4-201ENST00000588022 1070 ntBASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11FIP4Q86YS3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB11FIP4Q86YS3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.64■□□□□ 0.58
RAB11FIP4Q86YS3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB11FIP4Q86YS3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB11FIP4Q86YS3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB11FIP4Q86YS3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms