Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.21■□□□□ 0.99
NME9Q86XW9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.21■□□□□ 0.99
NME9Q86XW9 RN7SL219P-201ENST00000582872 296 ntBASIC21.21■□□□□ 0.99
NME9Q86XW9 AC009542.2-202ENST00000619004 1067 ntBASIC21.21■□□□□ 0.99
NME9Q86XW9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.21■□□□□ 0.99
NME9Q86XW9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NME9Q86XW9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.21■□□□□ 0.99
NME9Q86XW9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.21■□□□□ 0.99
NME9Q86XW9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.21■□□□□ 0.99
NME9Q86XW9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME9Q86XW9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NME9Q86XW9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NME9Q86XW9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 ACKR1-201ENST00000368121 1240 ntBASIC21.2■□□□□ 0.98
NME9Q86XW9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NME9Q86XW9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC108725.1-201ENST00000495472 409 ntBASIC21.2■□□□□ 0.98
NME9Q86XW9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.2■□□□□ 0.98
NME9Q86XW9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NME9Q86XW9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME9Q86XW9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NME9Q86XW9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.2■□□□□ 0.98
NME9Q86XW9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC21.2■□□□□ 0.98
NME9Q86XW9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NME9Q86XW9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.19■□□□□ 0.98
NME9Q86XW9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.19■□□□□ 0.98
NME9Q86XW9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NME9Q86XW9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.19■□□□□ 0.98
NME9Q86XW9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NME9Q86XW9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.19■□□□□ 0.98
NME9Q86XW9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.19■□□□□ 0.98
NME9Q86XW9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
NME9Q86XW9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME9Q86XW9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.18■□□□□ 0.98
NME9Q86XW9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NME9Q86XW9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NME9Q86XW9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.18■□□□□ 0.98
NME9Q86XW9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NME9Q86XW9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.18■□□□□ 0.98
NME9Q86XW9 FAM21FP-201ENST00000426241 1131 ntBASIC21.18■□□□□ 0.98
NME9Q86XW9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.18■□□□□ 0.98
NME9Q86XW9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NME9Q86XW9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.18■□□□□ 0.98
NME9Q86XW9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.18■□□□□ 0.98
NME9Q86XW9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME9Q86XW9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms