Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 BCRP6-201ENST00000510112 632 ntBASIC16.08■□□□□ 0.16
C12orf40Q86WS4 BCRP7-201ENST00000511549 544 ntBASIC16.08■□□□□ 0.16
C12orf40Q86WS4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.08■□□□□ 0.16
C12orf40Q86WS4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
C12orf40Q86WS4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AL596087.1-201ENST00000400979 1969 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 CTBP2P5-201ENST00000454986 1264 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AP001889.1-201ENST00000525414 633 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC068587.3-201ENST00000526613 355 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC000095.1-201ENST00000603208 874 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC005252.2-201ENST00000624630 1141 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 AC093525.8-201ENST00000624099 1342 ntBASIC16.07■□□□□ 0.16
C12orf40Q86WS4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf40Q86WS4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 REXO1L6P-201ENST00000603433 1515 ntBASIC16.06■□□□□ 0.16
C12orf40Q86WS4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 KRT18P43-201ENST00000469825 1281 ntBASIC16.06■□□□□ 0.16
C12orf40Q86WS4 RPL13AP25-201ENST00000484130 612 ntBASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf40Q86WS4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms