Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD4Q7Z3J3 AC078925.2-201ENST00000624013 1973 ntBASIC19.54■□□□□ 0.72
RGPD4Q7Z3J3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD4Q7Z3J3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 AC012362.1-201ENST00000434906 739 ntBASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 AC104073.2-201ENST00000453737 312 ntBASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 SHC1P1-201ENST00000425230 1745 ntBASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD4Q7Z3J3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 FAM58BP-201ENST00000439056 645 ntBASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 SAMD11P1-201ENST00000571429 661 ntBASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RGPD4Q7Z3J3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 AC105137.3-201ENST00000617588 984 ntBASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 AL132780.4-201ENST00000624870 1135 ntBASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 FAM90A7P-201ENST00000382628 1395 ntBASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 FAM90A23P-201ENST00000400136 1395 ntBASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RGPD4Q7Z3J3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 AL157813.1-201ENST00000612996 587 ntBASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 Z98259.2-201ENST00000641583 609 ntBASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RGPD4Q7Z3J3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC055811.4-201ENST00000624039 1754 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 FAM90A2P-201ENST00000511144 1395 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 FAM90A25P-201ENST00000528404 1395 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC078875.1-201ENST00000431907 724 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC026410.1-201ENST00000507366 1101 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AL118516.1-201ENST00000564152 670 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC026803.1-201ENST00000569130 274 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 AC004466.1-201ENST00000599515 1080 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 FO393412.1-201ENST00000619841 382 ntBASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RGPD4Q7Z3J3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms