Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 RNA5SP421-201ENST00000516864 134 ntBASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD3Q7Z3D4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 TSPY26P-202ENST00000565928 3884 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 BASP1P1-201ENST00000430708 665 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AC093214.1-201ENST00000511688 1107 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AL512361.1-201ENST00000554200 418 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AL450472.2-201ENST00000603663 1156 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AL590560.3-201ENST00000623350 461 ntBASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.98■□□□□ 0.15
LYSMD3Q7Z3D4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms