Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCBE1Q6UXH8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC097374.2-201ENST00000618617 1306 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MROH4P-201ENST00000431302 1578 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC007967.3-201ENST00000434308 558 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 SAPCD2P3-201ENST00000455031 850 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AJ011931.1-201ENST00000618749 2492 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 AC126335.2-201ENST00000623362 4637 ntBASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCBE1Q6UXH8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 FDX1P1-201ENST00000449115 551 ntBASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 AC009078.2-202ENST00000463353 338 ntBASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.22□□□□□ -0.13
CCBE1Q6UXH8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms