Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 AC004233.3-201ENST00000607794 1269 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 CROCCP1-201ENST00000426910 5675 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 AC013268.4-201ENST00000637413 2228 ntBASIC16.92■□□□□ 0.3
VSTM1Q6UX27 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSTM1Q6UX27 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.91■□□□□ 0.3
VSTM1Q6UX27 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSTM1Q6UX27 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 BNIP3P1-202ENST00000550043 1585 ntBASIC16.9■□□□□ 0.3
VSTM1Q6UX27 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 MIR648-201ENST00000385046 94 ntBASIC16.9■□□□□ 0.3
VSTM1Q6UX27 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 CRB3P1-201ENST00000449338 276 ntBASIC16.9■□□□□ 0.3
VSTM1Q6UX27 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms