Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AC138969.3-201ENST00000546612 1459 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AC138932.2-201ENST00000548268 1459 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AC126755.4-201ENST00000549796 1459 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SLC7A15P-201ENST00000424028 1363 ntBASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 AC087499.6-201ENST00000411576 835 ntBASIC14.37□□□□□ -0.11
RTL6Q6ICC9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.37□□□□□ -0.11
RTL6Q6ICC9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTL6Q6ICC9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 CYP4F24P-201ENST00000586049 1580 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 OR8S1-201ENST00000310194 1080 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 AC098614.1-201ENST00000368528 745 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 HIST3H2BA-201ENST00000436555 524 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 KRT17P7-201ENST00000451704 1104 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 WASH4P-201ENST00000564273 1246 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 AC008494.3-201ENST00000606615 944 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.36□□□□□ -0.11
RTL6Q6ICC9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms