Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF9Q5VWM5 TMBIM7P-203ENST00000641617 1718 ntBASIC15.29■□□□□ 0.04
PRAMEF9Q5VWM5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF9Q5VWM5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 FO393414.2-201ENST00000405153 598 ntBASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AC074338.1-201ENST00000416825 156 ntBASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF9Q5VWM5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AC087481.3-201ENST00000602886 1894 ntBASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AL589739.1-201ENST00000607720 493 ntBASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 SPDYE12P-201ENST00000618416 771 ntBASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 AC093028.1-201ENST00000622998 982 ntBASIC15.27■□□□□ 0.04
PRAMEF9Q5VWM5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF9Q5VWM5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms