Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 MIR4453-201ENST00000584019 89 ntBASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 AC006058.4-201ENST00000624016 1670 ntBASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDKL4Q5MAI5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AC004967.1-201ENST00000453589 447 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AC069262.1-201ENST00000539058 672 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MIR6080-201ENST00000617359 66 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AC134684.3-201ENST00000641758 218 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AC013268.4-201ENST00000637413 2228 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AL607033.1-201ENST00000623900 1599 ntBASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDKL4Q5MAI5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CDKL4Q5MAI5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 AC073347.1-201ENST00000421633 2643 ntBASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 RPL5P21-201ENST00000404620 815 ntBASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 SERBP1P3-201ENST00000459980 809 ntBASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 SNHG9-202ENST00000564014 471 ntBASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 MIR6069-201ENST00000620069 79 ntBASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDKL4Q5MAI5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms