Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 KRT8P44-201ENST00000441609 1350 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFX4Q33E94 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 AL359258.3-201ENST00000622910 2331 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.85□□□□□ -0.03
RFX4Q33E94 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.85□□□□□ -0.03
RFX4Q33E94 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFX4Q33E94 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 AC004790.2-201ENST00000623588 572 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 TP73-AS1-207ENST00000624167 988 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.85□□□□□ -0.03
RFX4Q33E94 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.85□□□□□ -0.03
RFX4Q33E94 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.85□□□□□ -0.03
RFX4Q33E94 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 AC091951.1-201ENST00000512854 2465 ntBASIC14.85□□□□□ -0.03
RFX4Q33E94 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.85□□□□□ -0.03
RFX4Q33E94 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RFX4Q33E94 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFX4Q33E94 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 AP002414.3-201ENST00000589352 1468 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RFX4Q33E94 RPS2P28-201ENST00000314255 741 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 HNRNPDP1-201ENST00000439535 754 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 FAM197Y8-203ENST00000450145 560 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.84□□□□□ -0.03
RFX4Q33E94 ACTL9-202ENST00000612068 1252 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 AC012313.10-201ENST00000623509 926 ntBASIC14.84□□□□□ -0.03
RFX4Q33E94 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms