Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX3P78415 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
IRX3P78415 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 AL122018.1-201ENST00000446607 2310 ntBASIC18.54■□□□□ 0.56
IRX3P78415 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 AC004987.2-201ENST00000395959 1148 ntBASIC18.53■□□□□ 0.56
IRX3P78415 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.53■□□□□ 0.56
IRX3P78415 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.53■□□□□ 0.56
IRX3P78415 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.53■□□□□ 0.56
IRX3P78415 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 AC005915.1-201ENST00000624912 2018 ntBASIC18.53■□□□□ 0.56
IRX3P78415 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX3P78415 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX3P78415 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX3P78415 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 AL691432.1-201ENST00000596308 1422 ntBASIC18.52■□□□□ 0.56
IRX3P78415 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
IRX3P78415 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.52■□□□□ 0.56
IRX3P78415 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
IRX3P78415 AC243562.2-201ENST00000561247 970 ntBASIC18.52■□□□□ 0.56
IRX3P78415 AL158212.4-201ENST00000624062 1286 ntBASIC18.52■□□□□ 0.56
IRX3P78415 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
IRX3P78415 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX3P78415 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
IRX3P78415 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IRX3P78415 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
IRX3P78415 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.52■□□□□ 0.55
IRX3P78415 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
IRX3P78415 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IRX3P78415 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IRX3P78415 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
IRX3P78415 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IRX3P78415 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
IRX3P78415 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 KRT8P22-201ENST00000562317 1415 ntBASIC18.51■□□□□ 0.55
IRX3P78415 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 AZGP1P1-201ENST00000411909 902 ntBASIC18.51■□□□□ 0.55
IRX3P78415 AL162726.2-201ENST00000438986 1017 ntBASIC18.51■□□□□ 0.55
IRX3P78415 USP32P1-208ENST00000506594 1164 ntBASIC18.51■□□□□ 0.55
IRX3P78415 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms