Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.03□□□□□ -0.16
UBE2NP61088 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.03□□□□□ -0.16
UBE2NP61088 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
UBE2NP61088 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
UBE2NP61088 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
UBE2NP61088 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.03□□□□□ -0.16
UBE2NP61088 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.03□□□□□ -0.16
UBE2NP61088 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
UBE2NP61088 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
UBE2NP61088 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2NP61088 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
UBE2NP61088 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2NP61088 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2NP61088 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2NP61088 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UBE2NP61088 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBE2NP61088 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.02□□□□□ -0.16
UBE2NP61088 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2NP61088 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2NP61088 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
UBE2NP61088 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2NP61088 SPDYE17-201ENST00000412399 783 ntBASIC14.02□□□□□ -0.17
UBE2NP61088 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
UBE2NP61088 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2NP61088 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.02□□□□□ -0.17
UBE2NP61088 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2NP61088 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2NP61088 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.02□□□□□ -0.17
UBE2NP61088 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBE2NP61088 AL590560.3-201ENST00000623350 461 ntBASIC14.02□□□□□ -0.17
UBE2NP61088 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2NP61088 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2NP61088 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2NP61088 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.01□□□□□ -0.17
UBE2NP61088 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 KRT8P37-201ENST00000451609 1420 ntBASIC14.01□□□□□ -0.17
UBE2NP61088 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
UBE2NP61088 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 FO393414.2-201ENST00000405153 598 ntBASIC14.01□□□□□ -0.17
UBE2NP61088 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 AL080243.2-201ENST00000418783 582 ntBASIC14.01□□□□□ -0.17
UBE2NP61088 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2NP61088 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.01□□□□□ -0.17
UBE2NP61088 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2NP61088 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2NP61088 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms