Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
FAM3BP58499 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 AL049757.1-201ENST00000616842 1596 ntBASIC12.49□□□□□ -0.41
FAM3BP58499 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
FAM3BP58499 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 KRT18P31-201ENST00000506277 1292 ntBASIC12.49□□□□□ -0.41
FAM3BP58499 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 AL121894.2-201ENST00000602977 491 ntBASIC12.49□□□□□ -0.41
FAM3BP58499 AC013467.2-201ENST00000605472 835 ntBASIC12.49□□□□□ -0.41
FAM3BP58499 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
FAM3BP58499 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 CICP20-201ENST00000443330 2801 ntBASIC12.49□□□□□ -0.41
FAM3BP58499 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
FAM3BP58499 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
FAM3BP58499 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.49□□□□□ -0.41
FAM3BP58499 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.49□□□□□ -0.41
FAM3BP58499 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM3BP58499 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM3BP58499 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
FAM3BP58499 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM3BP58499 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
FAM3BP58499 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
FAM3BP58499 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.48□□□□□ -0.41
FAM3BP58499 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.48□□□□□ -0.41
FAM3BP58499 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.48□□□□□ -0.41
FAM3BP58499 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM3BP58499 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.48□□□□□ -0.41
FAM3BP58499 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.48□□□□□ -0.41
FAM3BP58499 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM3BP58499 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms