Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC036164.1-201ENST00000570544 333 ntBASIC11.65□□□□□ -0.54
APOC4P55056 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 AC099568.2-201ENST00000609194 695 ntBASIC11.65□□□□□ -0.54
APOC4P55056 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.65□□□□□ -0.54
APOC4P55056 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
APOC4P55056 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
APOC4P55056 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.65□□□□□ -0.54
APOC4P55056 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.65□□□□□ -0.54
APOC4P55056 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
APOC4P55056 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
APOC4P55056 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 AC097376.2-205ENST00000610159 5334 ntBASIC11.65□□□□□ -0.55
APOC4P55056 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
APOC4P55056 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
APOC4P55056 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
APOC4P55056 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 CU639417.3-201ENST00000624240 1404 ntBASIC11.64□□□□□ -0.55
APOC4P55056 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.64□□□□□ -0.55
APOC4P55056 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 HIST3H2BA-201ENST00000436555 524 ntBASIC11.64□□□□□ -0.55
APOC4P55056 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.64□□□□□ -0.55
APOC4P55056 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.64□□□□□ -0.55
APOC4P55056 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
APOC4P55056 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
APOC4P55056 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
APOC4P55056 AC093726.1-201ENST00000608064 963 ntBASIC11.64□□□□□ -0.55
APOC4P55056 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.64□□□□□ -0.55
APOC4P55056 AC007431.3-201ENST00000623221 587 ntBASIC11.64□□□□□ -0.55
APOC4P55056 AL035252.4-201ENST00000624174 288 ntBASIC11.64□□□□□ -0.55
APOC4P55056 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
APOC4P55056 REXO1L1P-202ENST00000608646 1974 ntBASIC11.64□□□□□ -0.55
APOC4P55056 AC134407.2-201ENST00000625089 1978 ntBASIC11.64□□□□□ -0.55
APOC4P55056 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOC4P55056 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.64□□□□□ -0.55
APOC4P55056 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 MTHFR-217ENST00000641820 1569 ntBASIC11.63□□□□□ -0.55
APOC4P55056 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms