Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CACNB3P54284 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNB3P54284 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNB3P54284 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNB3P54284 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.68■□□□□ 0.58
CACNB3P54284 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
CACNB3P54284 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNB3P54284 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNB3P54284 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNB3P54284 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.67■□□□□ 0.58
CACNB3P54284 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 NKILA-202ENST00000614771 2598 ntBASIC18.67■□□□□ 0.58
CACNB3P54284 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.67■□□□□ 0.58
CACNB3P54284 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.67■□□□□ 0.58
CACNB3P54284 AC099548.2-209ENST00000480264 625 ntBASIC18.67■□□□□ 0.58
CACNB3P54284 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CACNB3P54284 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNB3P54284 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNB3P54284 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNB3P54284 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNB3P54284 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNB3P54284 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB3P54284 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNB3P54284 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB3P54284 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB3P54284 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
CACNB3P54284 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNB3P54284 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB3P54284 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB3P54284 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB3P54284 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 RPL13AP20-201ENST00000459725 609 ntBASIC18.66■□□□□ 0.58
CACNB3P54284 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNB3P54284 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNB3P54284 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 AC010328.2-201ENST00000597698 1111 ntBASIC18.66■□□□□ 0.58
CACNB3P54284 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB3P54284 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB3P54284 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CACNB3P54284 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CACNB3P54284 PCDHA14-201ENST00000506751 2298 ntBASIC18.66■□□□□ 0.58
CACNB3P54284 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB3P54284 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms