Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.54■□□□□ 0.4
LBX1P52954 AC084752.1-201ENST00000509766 622 ntBASIC17.54■□□□□ 0.4
LBX1P52954 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.54■□□□□ 0.4
LBX1P52954 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.54■□□□□ 0.4
LBX1P52954 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LBX1P52954 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
LBX1P52954 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.54■□□□□ 0.4
LBX1P52954 AC087392.5-201ENST00000612517 489 ntBASIC17.54■□□□□ 0.4
LBX1P52954 AC002472.4-201ENST00000641915 272 ntBASIC17.54■□□□□ 0.4
LBX1P52954 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LBX1P52954 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LBX1P52954 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LBX1P52954 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
LBX1P52954 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LBX1P52954 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 AC239868.1-201ENST00000369385 493 ntBASIC17.53■□□□□ 0.4
LBX1P52954 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 AC026320.2-201ENST00000434379 478 ntBASIC17.53■□□□□ 0.4
LBX1P52954 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.53■□□□□ 0.4
LBX1P52954 FAM86B3P-203ENST00000523992 854 ntBASIC17.53■□□□□ 0.4
LBX1P52954 AC009779.1-201ENST00000551138 283 ntBASIC17.53■□□□□ 0.4
LBX1P52954 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 AC097359.3-201ENST00000603982 1210 ntBASIC17.53■□□□□ 0.4
LBX1P52954 AC004686.1-201ENST00000605113 538 ntBASIC17.53■□□□□ 0.4
LBX1P52954 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 AC010503.4-201ENST00000615487 688 ntBASIC17.53■□□□□ 0.4
LBX1P52954 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.53■□□□□ 0.4
LBX1P52954 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LBX1P52954 AC090164.3-201ENST00000610780 2143 ntBASIC17.53■□□□□ 0.4
LBX1P52954 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.53■□□□□ 0.4
LBX1P52954 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LBX1P52954 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
LBX1P52954 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 AL357563.1-201ENST00000404728 395 ntBASIC17.52■□□□□ 0.4
LBX1P52954 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.52■□□□□ 0.4
LBX1P52954 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.52■□□□□ 0.4
LBX1P52954 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.52■□□□□ 0.4
LBX1P52954 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.52■□□□□ 0.4
LBX1P52954 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.52■□□□□ 0.4
LBX1P52954 TMCO5B-205ENST00000530020 894 ntBASIC17.52■□□□□ 0.4
LBX1P52954 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.52■□□□□ 0.4
LBX1P52954 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.52■□□□□ 0.4
LBX1P52954 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 MIR4783-201ENST00000580343 82 ntBASIC17.52■□□□□ 0.4
LBX1P52954 MIR4472-1-201ENST00000584349 80 ntBASIC17.52■□□□□ 0.4
LBX1P52954 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LBX1P52954 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.52■□□□□ 0.39
LBX1P52954 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LBX1P52954 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.52■□□□□ 0.39
LBX1P52954 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
LBX1P52954 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LBX1P52954 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LBX1P52954 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.51■□□□□ 0.39
LBX1P52954 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.51■□□□□ 0.39
LBX1P52954 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms